Visualisation of nucleotide sequences
Articles
Tomas Rekašius
Vilnius Gediminas Technical University
Published 2023-09-21
https://doi.org/10.15388/LMR.2006.30765
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Keywords

DNA sequences
complexity measure
multidimensional scaling

How to Cite

Rekašius, T. (2023) “Visualisation of nucleotide sequences”, Lietuvos matematikos rinkinys, 46(spec.), pp. 390–396. doi:10.15388/LMR.2006.30765.

Abstract

The paper reviews the visualisation problems of genetic sequences and of their analysis results as well as other related problems. A possible formulation of the problem based on similarity, complexity measure (distance) between DNA sequences is proposed. It is solved by making use of multidimensional scaling (MDS) of principal component analysis (PCA) methods.

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